{"id":8293,"date":"2026-08-10T09:54:15","date_gmt":"2026-08-10T09:54:15","guid":{"rendered":"https:\/\/nokobox.com\/index.php\/item\/udemy-bioinformatics-learn-docking-mol-dynamics-simulation-2024-12\/"},"modified":"2026-08-10T09:54:15","modified_gmt":"2026-08-10T09:54:15","slug":"udemy-bioinformatics-learn-docking-mol-dynamics-simulation-2024-12","status":"publish","type":"digital_item","link":"https:\/\/nokobox.com\/index.php\/item\/udemy-bioinformatics-learn-docking-mol-dynamics-simulation-2024-12\/","title":{"rendered":"Udemy \u2013 Bioinformatics; Learn Docking &#038; Mol Dynamics Simulation 2024-12"},"content":{"rendered":"<div class=\"w-post-elm post_content\">\n<h2>Descriptions<\/h2>\n<p>Bioinformatics; Learn Docking &amp; Mol Dynamics Simulation, Currently, there is high use of bioinformatics tools in biological studies. This Advance Bioinformatics course includes theory and practical aspects of molecular docking and molecular dynamics simulation for you. In this course, we have tried to explain the theory and practical steps which are required to perform the above-mentioned bioinformatics techniques. We strongly believe that after having this course, you will be well versed in ligand-protein docking and molecular dynamics simulations. This course is designed to keep the need of biologists in view. We tried to explain every step in a simple and elegant way. Like our previous course, \u201cLearn Bioinformatics From Scratch (Theory &amp; Practical)\u201d in this course, we took start from scratch. So, if you are new in this field then it will be easy for you to move with the flow. There is a total of seven modules with 104 lectures.<\/p>\n<p>This course is a unique blend of theory and practical. We assure you that after having this course, performing molecular docking and molecular dynamics will be easy for you. We have used open-source software in this course so that you do not need to purchase any expensive software. The tools which are demonstrated in this course are Modeller, I-TASSER, Alpha-Fold (Colab), Auto-dock4, Vina, Patch-Dock, GROMACS, LigPlot, ChemSketch, OpenBabel, Pymol, and a lot more. These tools are freely available and closely related to the course material, and students will need to sign up for some tools to access it.<\/p>\n<h3>What you\u2019ll learn<\/h3>\n<ul>\n<li>You will learn basics of Structural Bioinformatics Including Protein Structure Prediction<\/li>\n<li>You will learn Basic Theory of Molecular Dynamics Simulations and Docking<\/li>\n<li>You will Get Basic Introduction of Linux Operating Systems and Its Commands<\/li>\n<li>You will have Practical Demonstration of Protein Molecular Dynamics Simulations in GROMACS<\/li>\n<li>You will Learn Analysis of MD Trajectory Including RMSD, RMSF, Radius of Gyration, Solvent Accessible Surface Area, Total Number of Hydrogen Bonds etc<\/li>\n<li>You will have Practical Demonstration of AutoDock, Vina, CB-Dock and PatchDock for Ligand Protein Docking<\/li>\n<li>You will have Practical Demonstration of MD Simulation of Ligand-Protein Complex in GROMACS<\/li>\n<li>You will Learn about Virtual Screening of Drugs (Theory and Practical)<\/li>\n<\/ul>\n<h3>Who this course is for<\/h3>\n<ul>\n<li>This course is for those who are interested to drug discovery.<\/li>\n<li>This course is also suitable for those who want to be protein engineers and interested in denovo protein design.<\/li>\n<\/ul>\n<h3>Specificatoin of Bioinformatics; Learn Docking &amp; Mol Dynamics Simulation<\/h3>\n<ul>\n<li>Publisher : <a href=\"https:\/\/href.li\/?https:\/\/www.udemy.com\/course\/bioinformatics_advance\/?couponCode=LETSLEARNNOW\" target=\"_blank\" rel=\"noopener\">Udemy<\/a><\/li>\n<li>Teacher : <a href=\"https:\/\/downloadlynet.ir\/tag\/naeem-mahmood-ashraf\">Naeem Mahmood Ashraf<\/a><\/li>\n<li>Language : English<\/li>\n<li>Level : Beginner<\/li>\n<li>Number of Course : 114<\/li>\n<li>Duration : 8 hours and 19 minutes<\/li>\n<\/ul>\n<h3>Content of Bioinformatics; Learn Docking &amp; Mol Dynamics Simulation<\/h3>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-959644\" src=\"https:\/\/downloadly.ir\/wp-content\/uploads\/2025\/01\/Bioinformatics_-Learn-Docking-Mol-Dynamics-Simulation.c.jpeg\" alt=\"Bioinformatics_ Learn Docking &amp; Mol Dynamics Simulation\" width=\"705\" height=\"660\"><\/p>\n<h3>Requirements<\/h3>\n<ul dir=\"ltr\">\n<li>In online teaching, it\u2019s always hard to engage the students. Therefore we have designed this course keeping the psychology of students in view. Usually, students start to lose their interest when they are stuck in a complex concept that\u2019s why We tried to move from simple to complex easily and understandably.<\/li>\n<li>You need to be familiar with very basics of protein structures. This will be more then enough for you to take start of this course. We have tried our level best to take start from scratch in every module by assuming it that our students know nothing.<\/li>\n<li>Although, its not mandatory but we will encourage you to take our course \u201cLearn Bioinformatics From Scratch (Theory and Practical)\u201d on udemy. This course may also help you to grab the concepts in better way.<\/li>\n<\/ul>\n<h3>Pictures<\/h3>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter size-full wp-image-959645\" src=\"https:\/\/downloadly.ir\/wp-content\/uploads\/2025\/01\/Bioinformatics_-Learn-Docking-Mol-Dynamics-Simulation.d.jpeg\" alt=\"Bioinformatics_ Learn Docking &amp; Mol Dynamics Simulation\" width=\"705\" height=\"279\"><\/p>\n<h3>Sample Clip<\/h3>\n<div style=\"width: 640px;\" class=\"wp-video\"><span class=\"mejs-offscreen\">Video Player<\/span><\/p>\n<div id=\"mep_0\" class=\"mejs-container mejs-container-keyboard-inactive wp-video-shortcode mejs-video\" tabindex=\"0\" role=\"application\" aria-label=\"Video Player\" style=\"width: 640px; height: 360px; min-width: 217px;\">\n<div class=\"mejs-inner\">\n<div class=\"mejs-mediaelement\"><mediaelementwrapper id=\"video-152798-1\"><video class=\"wp-video-shortcode\" id=\"video-152798-1_html5\" width=\"640\" height=\"360\" preload=\"metadata\" src=\"https:\/\/dl.downloadly.ir\/Files\/Elearning\/Sample\/Bioinformatics__Learn_Docking_Mol_Dynamics_Simulation_Downloadly.ir.mp4?_=1\" style=\"width: 640px; height: 360px;\"><source type=\"video\/mp4\" src=\"https:\/\/dl.downloadly.ir\/Files\/Elearning\/Sample\/Bioinformatics__Learn_Docking_Mol_Dynamics_Simulation_Downloadly.ir.mp4?_=1\"><a href=\"https:\/\/dl.downloadly.ir\/Files\/Elearning\/Sample\/Bioinformatics__Learn_Docking_Mol_Dynamics_Simulation_Downloadly.ir.mp4?nocache=1786111903590\">https:\/\/dl.downloadly.ir\/Files\/Elearning\/Sample\/Bioinformatics__Learn_Docking_Mol_Dynamics_Simulation_Downloadly.ir.mp4<\/a><\/video><\/mediaelementwrapper><\/div>\n<div class=\"mejs-layers\">\n<div class=\"mejs-poster mejs-layer\" style=\"display: none; width: 100%; height: 100%;\"><\/div>\n<div class=\"mejs-overlay mejs-layer\" style=\"display: none; width: 100%; height: 100%;\">\n<div class=\"mejs-overlay-loading\"><span class=\"mejs-overlay-loading-bg-img\"><\/span><\/div>\n<\/div>\n<div class=\"mejs-overlay mejs-layer\" style=\"display: none; width: 100%; height: 100%;\">\n<div class=\"mejs-overlay-error\"><\/div>\n<\/div>\n<div class=\"mejs-overlay mejs-layer mejs-overlay-play\" style=\"width: 100%; height: 100%;\">\n<div class=\"mejs-overlay-button\" role=\"button\" tabindex=\"0\" aria-label=\"Play\" aria-pressed=\"false\"><\/div>\n<\/div>\n<\/div>\n<div class=\"mejs-controls\">\n<div class=\"mejs-button mejs-playpause-button mejs-play\"><button type=\"button\" aria-controls=\"mep_0\" title=\"Play\" aria-label=\"Play\" tabindex=\"0\"><\/button><\/div>\n<div class=\"mejs-time mejs-currenttime-container\" role=\"timer\" aria-live=\"off\"><span class=\"mejs-currenttime\">00:00<\/span><\/div>\n<div class=\"mejs-time-rail\"><span class=\"mejs-time-total mejs-time-slider\" role=\"slider\" tabindex=\"0\" aria-label=\"Time Slider\" aria-valuemin=\"0\" aria-valuemax=\"0\" aria-valuenow=\"0\" aria-valuetext=\"00:00\"><span class=\"mejs-time-buffering\" style=\"display: none;\"><\/span><span class=\"mejs-time-loaded\"><\/span><span class=\"mejs-time-current\"><\/span><span class=\"mejs-time-hovered no-hover\"><\/span><span class=\"mejs-time-handle\"><span class=\"mejs-time-handle-content\"><\/span><\/span><span class=\"mejs-time-float\"><span class=\"mejs-time-float-current\">00:00<\/span><span class=\"mejs-time-float-corner\"><\/span><\/span><\/span><\/div>\n<div class=\"mejs-time mejs-duration-container\"><span class=\"mejs-duration\">00:00<\/span><\/div>\n<div class=\"mejs-button mejs-volume-button mejs-mute\"><button type=\"button\" aria-controls=\"mep_0\" title=\"Mute\" aria-label=\"Mute\" tabindex=\"0\"><\/button><a href=\"javascript:void(0);\" class=\"mejs-volume-slider\" aria-label=\"Volume Slider\" aria-valuemin=\"0\" aria-valuemax=\"100\" role=\"slider\" aria-orientation=\"vertical\"><span class=\"mejs-offscreen\">Use Up\/Down Arrow keys to increase or decrease volume.<\/span><\/p>\n<div class=\"mejs-volume-total\">\n<div class=\"mejs-volume-current\" style=\"bottom: 0px; height: 100%;\"><\/div>\n<div class=\"mejs-volume-handle\" style=\"bottom: 100%; margin-bottom: -3px;\"><\/div>\n<\/div>\n<p><\/a><\/div>\n<div class=\"mejs-button mejs-fullscreen-button\"><button type=\"button\" aria-controls=\"mep_0\" title=\"Fullscreen\" aria-label=\"Fullscreen\" tabindex=\"0\"><\/button><\/div>\n<\/div>\n<\/div>\n<\/div>\n<\/div>\n<h3>Installation Guide<\/h3>\n<p>Extract the files and watch with your favorite player<\/p>\n<p>Subtitle : English<\/p>\n<p>Quality: 720p<\/p>\n<h3>Download Links<\/h3>\n<p><a href=\"https:\/\/dl1.downloadly.ir\/Files\/Elearning\/Udemy_Bioinformatics_Learn_Docking_Mol_Dynamics_Simulation_2024-12_Downloadly.ir.part1.rar?nocache=1786111902\">Download Part 1 \u2013 1 GB<\/a><\/p>\n<p><a href=\"https:\/\/dl1.downloadly.ir\/Files\/Elearning\/Udemy_Bioinformatics_Learn_Docking_Mol_Dynamics_Simulation_2024-12_Downloadly.ir.part2.rar?nocache=1786111902\">Download Part 2 \u2013 1 GB<\/a><\/p>\n<p><a href=\"https:\/\/dl1.downloadly.ir\/Files\/Elearning\/Udemy_Bioinformatics_Learn_Docking_Mol_Dynamics_Simulation_2024-12_Downloadly.ir.part3.rar?nocache=1786111902\">Download Part 3 \u2013 1 GB<\/a><\/p>\n<p><a href=\"https:\/\/dl1.downloadly.ir\/Files\/Elearning\/Udemy_Bioinformatics_Learn_Docking_Mol_Dynamics_Simulation_2024-12_Downloadly.ir.part4.rar?nocache=1786111902\">Download Part 4 \u2013 50 MB<\/a><\/p>\n<h5>Password file(s): <a>www.downloadly.ir<\/a><\/h5>\n<h3>File size<\/h3>\n<p>3.04 GB<\/p>\n<\/div>\n","protected":false},"excerpt":{"rendered":"<p>Descriptions Bioinformatics; Learn Docking &amp; Mol Dynamics Simulation, Currently, there is high use of bioinformatics tools in biological studies. This Advan<\/p>\n","protected":false},"author":1,"template":"","dgi_category":[10458],"dgi_tag":[73660,73661,73662,73663,73664,73665,73666,73667,73668],"class_list":["post-8293","digital_item","type-digital_item","status-publish","has-post-thumbnail","hentry","dgi_category-video-tutorials","dgi_tag-bioinformatics-learn-docking-mol-dynamics-simulation","dgi_tag-bioinformatics-learn-docking-mol-dynamics-simulation-download","dgi_tag-bioinformatics-learn-docking-mol-dynamics-simulation-free","dgi_tag-bioinformatics-learn-docking-mol-dynamics-simulation-free-download","dgi_tag-download-bioinformatics-learn-docking-mol-dynamics-simulation","dgi_tag-free-bioinformatics-learn-docking-mol-dynamics-simulation","dgi_tag-free-download-bioinformatics-learn-docking-mol-dynamics-simulation","dgi_tag-naeem-mahmood-ashraf","dgi_tag-udemy-bioinformatics-learn-docking-mol-dynamics-simulation"],"_links":{"self":[{"href":"https:\/\/nokobox.com\/index.php\/wp-json\/wp\/v2\/digital_item\/8293","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/nokobox.com\/index.php\/wp-json\/wp\/v2\/digital_item"}],"about":[{"href":"https:\/\/nokobox.com\/index.php\/wp-json\/wp\/v2\/types\/digital_item"}],"author":[{"embeddable":true,"href":"https:\/\/nokobox.com\/index.php\/wp-json\/wp\/v2\/users\/1"}],"version-history":[{"count":0,"href":"https:\/\/nokobox.com\/index.php\/wp-json\/wp\/v2\/digital_item\/8293\/revisions"}],"wp:attachment":[{"href":"https:\/\/nokobox.com\/index.php\/wp-json\/wp\/v2\/media?parent=8293"}],"wp:term":[{"taxonomy":"dgi_category","embeddable":true,"href":"https:\/\/nokobox.com\/index.php\/wp-json\/wp\/v2\/dgi_category?post=8293"},{"taxonomy":"dgi_tag","embeddable":true,"href":"https:\/\/nokobox.com\/index.php\/wp-json\/wp\/v2\/dgi_tag?post=8293"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}